Information for 5-GGAGGAGAAGTSAGGC (Motif 13)

A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
Reverse Opposite:
A C T G A T G C A G T C A G C T T A C G C T G A A G T C A G C T A G C T A G T C A C G T T A G C A T G C G A C T A G T C A G T C
p-value:1e-7
log p-value:-1.742e+01
Information Content per bp:1.724
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.6 +/- 27.4bp
Average Position of motif in Background52.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGAAGTSAGGC
TGGGGCAAAGGTCA---
 A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGAGGAGAAGTSAGGC
GTAGGGCAAAGGTCA---
 A C G T A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGAGGAGAAGTSAGGC
TAGGGCAAAGGTCA---
 A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGAGAAGTSAGGC
NNNNGGGGGAAGANGG--
 A C G T A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGAGAAGTSAGGC
GGGAGGACNG-------
 A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGAGGAGAAGTSAGGC-----
GGAGGAGGAGGGGGAGGAGGA
 A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGAGAAGTSAGGC
GTGGGGGAGGGG------
 A C G T A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGAGGAGAAGTSAGGC
AGGGGTCAGAGGTCA---
 A C G T A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGAGGAGAAGTSAGGC
GGGCGGGAAGG-------
 A C G T A C G T A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GGAGGAGAAGTSAGGC
----CGGAAGTGAAAC
 A C T G T A C G C T G A T A C G A C T G C G T A A C T G C T G A C T G A C T A G A G C T A T G C T C G A C T A G A T C G G T A C
A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C