Information for 6-GAAKGCAGCAGAG (Motif 9)

A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
Reverse Opposite:
A G T C C G A T A T G C C A G T T C A G A G T C G A C T A C T G A G T C G T C A C G A T A G C T T A G C
p-value:1e-6
log p-value:-1.576e+01
Information Content per bp:1.696
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.22%
Number of Background Sequences with motif303.3
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets54.2 +/- 21.0bp
Average Position of motif in Background51.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAKGCAGCAGAG
-AAAGRGGAAGTG
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAKGCAGCAGAG
---NGAAGC----
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAAKGCAGCAGAG
---CGCAGCTGCG
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAAKGCAGCAGAG
---ANCAGCTG--
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAAKGCAGCAGAG-
----GCAGCTGTNN
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GAAKGCAGCAGAG
---GGGAGGACNG
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAAKGCAGCAGAG
-NNAGCAGCTGCT
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAAKGCAGCAGAG-
---GACAGCTGCAG
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G A C G T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAAKGCAGCAGAG
--NAHCAGCTGD-
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAAKGCAGCAGAG
---AACAGCTG--
 A T C G C T G A C G T A C A G T C T A G G T A C C G T A A C T G A G T C G C T A A T C G C G T A T A C G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T