Information for 10-TCAGGACAKCAGG (Motif 21)

C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T T C A G T G A C C A G T A T C G G A C T A G T C G A T C C G A T A C T G G C T A
p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.790
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif53.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets58.8 +/- 26.2bp
Average Position of motif in Background51.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCAGGACAKCAGG---
-CCACACAGCAGGAGA
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCAGGACAKCAGG---
----CACAGCAGGGGG
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAGGACAKCAGG---
-GAGCACAGCAGGACA
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCAGGACAKCAGG-----
---DCHCAGCAGGRGGCC
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAGGACAKCAGG
TRAGGTCA-----
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCAGGACAKCAGG---
-CCACACAGCAGGAGA
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGACAKCAGG
NACAGGAAAT----
 A C G T C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCAGGACAKCAGG
---DCTCAGCAGG
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCAGGACAKCAGG---
-GAGGTCAAAAGGTCA
 C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCAGGACAKCAGG
NACAGGAAAT----
 A C G T C A G T A G T C C G T A C A T G A C T G C G T A A T G C G C T A A C T G A G T C C G T A A C T G A C T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T