Information for 1-TCAGAGTGACCTG (Motif 1)

C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G
Reverse Opposite:
A G T C T C G A C T A G A C T G C G A T A G T C C G T A A T G C G A C T A G T C C G A T T C A G G T C A
p-value:1e-19
log p-value:-4.398e+01
Information Content per bp:1.773
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets44.3 +/- 17.9bp
Average Position of motif in Background55.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGTGACCTG
GGTCANNGTGACCTN
 A C G T A C G T C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TCAGAGTGACCTG
AGGNCANNGTGACCT-
 A C G T A C G T A C G T C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TCAGAGTGACCTG
AAGGTCACGGTGACCTG
 A C G T A C G T A C G T A C G T C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:TCAGAGTGACCTG
------TGACCT-
 C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TCAGAGTGACCTG
-----GTGACCTT
 C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCAGAGTGACCTG-----
--NNNNTGACCCGGCGCG
 C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TCAGAGTGACCTG-
------TGACCTYA
 C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TCAGAGTGACCTG---
------TGACCTTGAT
 C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TCAGAGTGACCTG-
------TGACCYCT
 C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TCAGAGTGACCTG--
-----NTGACCTTGA
 C A G T A G T C C G T A T C A G C T G A A T C G A C G T C T A G G C T A G T A C G A T C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A