p-value: | 1e-14 |
log p-value: | -3.265e+01 |
Information Content per bp: | 1.691 |
Number of Target Sequences with motif | 43.0 |
Percentage of Target Sequences with motif | 4.74% |
Number of Background Sequences with motif | 526.7 |
Percentage of Background Sequences with motif | 1.11% |
Average Position of motif in Targets | 54.5 +/- 29.6bp |
Average Position of motif in Background | 50.0 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NR4A2/MA0160.1/Jaspar
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTAGGTCACT -AAGGTCAC- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTAGGTCACT TRAGGTCA-- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 3 |
Score: | 0.73 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTAGGTCACT --AGGTCA-- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 4 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTAGGTCACT AAYTAGGTCA-- |
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RORA/MA0071.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTAGGTCACT ATCAAGGTCA-- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TTAGGTCACT TATAAGTAGGTCAA- |
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PB0133.1_Hic1_2/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTAGGTCACT--- NNNNTTGGGCACNNCN |
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ESR2/MA0258.2/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTAGGTCACT------- --AGGTCACCCTGACCT |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTAGGTCACT TCAAGGTCAN- |
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Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
Match Rank: | 10 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTAGGTCACT------ GTAGGTCACTGGGTCA |
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