Information for 2-CTGGGAMTTGTAGTCY (Motif 4)

A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
Reverse Opposite:
T C A G T C A G C T G A A T G C C A G T T G C A A G T C C G T A C G T A C A G T A G C T A G T C A G T C G T A C T C G A A T C G
p-value:1e-14
log p-value:-3.414e+01
Information Content per bp:1.675
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif111.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets43.2 +/- 22.1bp
Average Position of motif in Background47.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:CTGGGAMTTGTAGTCY
--GGGAATTGTAGT--
 A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGAMTTGTAGTCY
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGAMTTGTAGTCY
GCATTCTGGGAATTGTAGTT-
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CTGGGAMTTGTAGTCY
RGSMTBCTGGGAAAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGAMTTGTAGTCY
CSTGGGAAAD-------
 A C G T A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAMTTGTAGTCY
WDNCTGGGCA---------
 A C G T A C G T A C G T A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAMTTGTAGTCY
CTTCTGGGAAA--------
 A C G T A C G T A C G T A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGAMTTGTAGTCY
TTCTTGGAAAN-------
 A C G T A C G T A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTGGGAMTTGTAGTCY-
-----NNHTGTGGTTWN
 A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTGGGAMTTGTAGTCY--
--GNNATTTGTCGTAANN
 A T G C A G C T A C T G C T A G T C A G C T G A G T C A C G A T G A C T C T A G A C G T G T C A A T C G A G C T A G T C A G T C A C G T A C G T
A C G T A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T