Information for 13-GGWCAASCGG (Motif 25)

A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
Reverse Opposite:
T G A C G T A C C A T G A T C G C A G T G A C T A C T G C G T A A T G C G T A C
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.677
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.18%
Number of Background Sequences with motif891.3
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets43.8 +/- 24.7bp
Average Position of motif in Background51.6 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GGWCAASCGG
CAAAGGTCAAGGG-
 A C G T A C G T A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGWCAASCGG
AGGTCA-----
 A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGWCAASCGG---
GAGGTCAAAAGGTCA
 A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------GGWCAASCGG
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGWCAASCGG
TRAGGTCA-----
 A C G T A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGWCAASCGG
AGRGGTCA-----
 A C G T A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGWCAASCGG----
AAGGTCAAAAGGTCAA
 A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGWCAASCGG---
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GGWCAASCGG
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GGWCAASCGG
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G G C A T A G T C C T G A G T C A A T G C G T A C A C T G A C T G
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C