Information for 5-GGSAGWKCTCAMC (Motif 9)

A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A T C G C G T A A C T G G T A C C G T A A G T C A C G T A T G C A G T C A G T C
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 30.3bp
Average Position of motif in Background21.2 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGSAGWKCTCAMC--
CGAACAGTGCTCACTAT
 A C G T A C G T A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGSAGWKCTCAMC
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGSAGWKCTCAMC---
GGCGAGGGGTCAAGGGC
 A C G T A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGSAGWKCTCAMC--
----NNACTTACCTN
 A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGSAGWKCTCAMC
TGGGGCAAAGGTCA--
 A C G T A C G T A C G T A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GGSAGWKCTCAMC--
------CCTCACCTG
 A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GGSAGWKCTCAMC
GTAGGGCAAAGGTCA--
 A C G T A C G T A C G T A C G T A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGSAGWKCTCAMC
--CNGTCCTCCC-
 A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGSAGWKCTCAMC
TGACAGGTGTCA--
 A C G T A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GGSAGWKCTCAMC
TGACAGGTGTCA--
 A C G T A C T G A C T G T A C G G T C A A C T G C G A T A C T G A G T C A C G T A T G C C G T A G T A C A G T C
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T