Information for 7-GGCAGGTCGR (Motif 8)

T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A
Reverse Opposite:
A G C T A T G C C T A G T C G A A T G C A G T C C G A T A C T G A G T C A T G C
p-value:1e-10
log p-value:-2.452e+01
Information Content per bp:1.803
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif189.8
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets57.2 +/- 25.2bp
Average Position of motif in Background51.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGGTCGR-
SDGCAGGTGCNS
 A C G T T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCAGGTCGR
AACAGGTGT-
 T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCAGGTCGR-
-VCAGGTRDRY
 T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A A C G T
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCAGGTCGR
NNCAGGTGNN
 T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCAGGTCGR
AAGGCAAGTGT-
 A C G T A C G T T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGGTCGR--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCAGGTCGR
NNCAGGTGCG
 T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGGTCGR
TNNGGGCAG-----
 A C G T A C G T A C G T A C G T T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCAGGTCGR-
--CAGGTGAGG
 T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A A C G T
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGCAGGTCGR-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C C G T A A C T G A T C G A C G T G A T C A T C G C T G A A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A