Information for 12-AGGAGTAAAT (Motif 14)

C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C G T A A G T C A C G T A G T C A G T C A C G T
p-value:1e-5
log p-value:-1.249e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.2 +/- 29.4bp
Average Position of motif in Background43.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGGAGTAAAT
AGGTGTTAAT
 C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGGAGTAAAT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AGGAGTAAAT---
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGAGTAAAT
AAGGTGTGAAA
 A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGAGTAAAT
AAGGTGTGAA-
 A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGAGTAAAT
AGGTGTGAAA
 C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTAAAT--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0171.1_Sox18_2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGGAGTAAAT-------
-GGACTGAATTCATGCC
 C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGAGTAAAT
TAGGTGTGAAG
 A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGAGTAAAT
NGGATTAA--
 C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C G T A A C G T
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T