Information for 1-GHMAAACAGGTTT (Motif 1)

A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T
Reverse Opposite:
C T G A C T G A C T G A A T G C G A T C C G A T A C T G A G C T G A C T G A C T C A T G C T A G T G A C
p-value:1e-103
log p-value:-2.389e+02
Information Content per bp:1.545
Number of Target Sequences with motif256.0
Percentage of Target Sequences with motif32.61%
Number of Background Sequences with motif3127.7
Percentage of Background Sequences with motif6.62%
Average Position of motif in Targets51.0 +/- 19.1bp
Average Position of motif in Background49.2 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.86
Offset:2
Orientation:forward strand
Alignment:GHMAAACAGGTTT-
--AAAACCGGTTTT
 A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T A C G T
A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:GHMAAACAGGTTT
---AAACCGGTTT
 A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T
A C G T A C G T A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:3
Score:0.79
Offset:-7
Orientation:reverse strand
Alignment:-------GHMAAACAGGTTT
VAAACYKGTHWAACMRGTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GHMAAACAGGTTT
----AACAGGTGT
 A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GHMAAACAGGTTT---
ANTNNTACATGTANNTN
 A C G T A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GHMAAACAGGTTT--
-----VCAGGTRDRY
 A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GHMAAACAGGTTT-----
-GAAAACTAGTTAACATC
 A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GHMAAACAGGTTT---
NNTTTTACATGTANNNT
 A C G T A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GHMAAACAGGTTT---
ANTATTACATGTANNNN
 A C G T A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

SCRT1/MA0743.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GHMAAACAGGTTT--
GAGCAACAGGTGGTT
 A C T G G A T C G T A C C T G A C T G A C T G A A G T C G C T A C T A G A T C G G A C T G A C T G A C T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T