Information for 6-TAGGGCAGGC (Motif 7)

A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C
Reverse Opposite:
C A T G A T G C G A T C A G C T T A C G A G T C T G A C G T A C C G A T T G C A
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.666
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.73%
Number of Background Sequences with motif1302.1
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets46.5 +/- 26.4bp
Average Position of motif in Background51.2 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCAGGC
TNNGGGCAG--
 A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAGGGCAGGC--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TAGGGCAGGC-
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGGGCAGGC--
-TGCGCAGGCGC
 A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C A C G T A C G T
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGGGCAGGC
AAYTAGGTCA---
 A C G T A C G T A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCAGGC
NGTGGGCAT--
 A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAGGGCAGGC--
TGGGGAAGGGCM
 A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C A C G T A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TAGGGCAGGC
TATAAGTAGGTCAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAGGGCAGGC---
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGGGCAGGC
TRAGGTCA---
 A C G T A C G T G C T A C A T G A C T G T C A G A T G C T C G A C T A G T A C G G T A C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T