Information for 5-AAACRTGTAA (Motif 4)

C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A
Reverse Opposite:
C G A T A G C T C G T A A G T C T G C A A G T C A C T G A C G T C G A T A C G T
p-value:1e-13
log p-value:-3.200e+01
Information Content per bp:1.805
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif392.6
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets46.4 +/- 28.8bp
Average Position of motif in Background51.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0085.1_Irx4/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAACRTGTAA----
AATATACATGTAAAACA
 A C G T A C G T A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0082.1_Irx2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAACRTGTAA----
TAAATACATGTAAAATT
 A C G T A C G T A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AAACRTGTAA----
AAAATACATGTAATACT
 A C G T A C G T A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAACRTGTAA----
AATATACATGTAAAATT
 A C G T A C G T A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAACRTGTAA----
AATATACATGTAATATA
 A C G T A C G T A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAACRTGTAA----
AAAATACATGTAAAAAT
 A C G T A C G T A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

GRHL1/MA0647.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAACRTGTAA-
AAAACCGGTTTT
 A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAACRTGTAA
AACACGTGTT-
 A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAACRTGTAA
TGTAAACAGGA--
 A C G T A C G T A C G T C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAACRTGTAA--
--VCAGGTRDRY
 C G T A C G T A C G T A A G T C C T A G A C G T A C T G C G A T C T G A C G T A A C G T A C G T
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C