Information for 6-AGCACAGGDTGTGACC (Motif 13)

C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T A G T C C G T A A T G C C G T A G A T C A G T C A G T C A C G T A C T G A C G T A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 17.6bp
Average Position of motif in Background45.7 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCACAGGDTGTGACC
NAGAACAGNCTGTNCT-
 A C G T C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCACAGGDTGTGACC
AGNACANNNTGTNCTN
 C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGCACAGGDTGTGACC
----NTGGGTGTGGCC
 C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCACAGGDTGTGACC
AAGAACATWHTGTTC--
 A C G T C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCACAGGDTGTGACC
VAGRACAKNCTGTBC--
 A C G T C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCACAGGDTGTGACC
NGGTACACNGTGTTCCC
 A C G T C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCACAGGDTGTGACC
VAGRACAKWCTGTYC--
 A C G T C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCACAGGDTGTGACC
---ACAGGATGTGGT-
 C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCACAGGDTGTGACC
GGGAACACAATGTTCCC
 A C G T C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCACAGGDTGTGACC
GGGTACATAATGTTCCC
 A C G T C G T A C T A G T G A C G T C A A G T C G T C A C T A G T C A G C A T G A C G T A T C G A C G T A C T G C T G A A G T C A G T C
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C