Information for 5-NRCTTTGYTGTTTTAC (Motif 9)

C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
Reverse Opposite:
C T A G A C G T C G T A C G T A C T G A C T G A G T A C C G T A C T G A A T G C C G T A C G T A C G T A C A T G A G C T A C G T
p-value:1e-11
log p-value:-2.735e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 18.8bp
Average Position of motif in Background60.5 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:NRCTTTGYTGTTTTAC---
---NNTTTTGTTTTGATNT
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:NRCTTTGYTGTTTTAC
-CCTTTGATCTTT---
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:NRCTTTGYTGTTTTAC
--GAATGTTTGTTT--
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:NRCTTTGYTGTTTTAC
NCNTTTGTTATTTNN-
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--NRCTTTGYTGTTTTAC
AACCCTTTGATCTTT---
 A C G T A C G T C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-NRCTTTGYTGTTTTAC
TNCCTTTGATCTTN---
 A C G T C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:NRCTTTGYTGTTTTAC
-ACTTTCGTTTCT---
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:NRCTTTGYTGTTTTAC
--NNGTANTGTTTTNC
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:NRCTTTGYTGTTTTAC
-NTNTTGTTGTTTGTN
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:NRCTTTGYTGTTTTAC
---TTTGCGGTTT---
 C G T A C T G A G T A C A C G T G C A T A C G T A T C G A G C T A C G T C A T G A G C T A G C T A C G T A C G T T C G A A G T C
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T