Information for 5-GGGCAKCYGYRGCCMK (Motif 6)

A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
Reverse Opposite:
G T A C A C G T A C T G A C T G A G T C A G C T C T A G A T G C C T G A A C T G G T A C A C G T A T C G A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.852
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 18.2bp
Average Position of motif in Background36.8 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCAKCYGYRGCCMK
-AGCAGCTGCTNN---
 A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAKCYGYRGCCMK
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGCAKCYGYRGCCMK
GGTCANYTGAGGWCA-
 A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCAKCYGYRGCCMK
-GACAGCTGCAG----
 A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGCAKCYGYRGCCMK
-CGCAGCTGCG-----
 A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGCAKCYGYRGCCMK
-TGCAGCTGTCCCT--
 A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGCAKCYGYRGCCMK
--NCAGCTGCTG----
 A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAKCYGYRGCCMK
NGTGGGCAT----------
 A C G T A C G T A C G T A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAKCYGYRGCCMK
NNNNTTGGGCACNNCN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGCAKCYGYRGCCMK
NNACAGCTGC------
 A C T G A C T G A C T G A T G C C G T A A C T G A G T C A G C T A T C G A G T C C T G A A C T G A G T C A G T C G T C A A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T