Information for 10-GTAGCTATTA (Motif 36)

A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A A T G C
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.945
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.8 +/- 29.0bp
Average Position of motif in Background44.3 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barhl1/MA0877.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTAGCTATTA--
--NNCAATTANN
 A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTAGCTATTA-
--ACCGATTAG
 A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GTAGCTATTA
NNTGTAGGTAGCANNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTAGCTATTA-
-AAACMATTAN
 A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

Hmx1/MA0896.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTAGCTATTA------
ACAAGCAATTAATGAAT
 A C G T A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTAGCTATTA------
ACAAGCAATTAATGAAT
 A C G T A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GTAGCTATTA-
---GCAATTAG
 A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTAGCTATTA-
---BCMATTAG
 A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTAGCTATTA--
--GGCCATTAAC
 A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Hmx3/MA0898.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAGCTATTA------
ACAAGCAATTAAAGAAT
 A C G T A T C G A C G T C G T A A C T G A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T