Information for 14-GCCTGGCTGCAGC (Motif 34)

A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 23.1bp
Average Position of motif in Background40.4 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCCTGGCTGCAGC
GTCATGCHTGRCTGS---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCTGGCTGCAGC
-SCTGTCARCACC
 A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCCTGGCTGCAGC
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGGCTGCAGC
TGCCCNGGGGCA--
 A C G T A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GCCTGGCTGCAGC-
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCTGGCTGCAGC
SCCTAGCAACAG-
 A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGCTGCAGC
AGGCCTAG-------
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGCTGCAGC
GGTCTGGCAT----
 A C G T A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCTGGCTGCAGC
--TWGTCTGV---
 A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCTGGCTGCAGC----
--ADGGYAGYAGCATCT
 A C T G A G T C A G T C A C G T A C T G C T A G A G T C C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T