Information for 19-GCGTGAGTAACAGGTT (Motif 28)

A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C A C G T A C T G A C G T A C G T C G T A A G T C A C G T A G T C G C T A A T G C A C T G A G T C
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.925
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 10.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCGTGAGTAACAGGTT
---TGAGTGACAGSC-
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCGTGAGTAACAGGTT---
----GAGCAACAGGTGGTT
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCGTGAGTAACAGGTT-
----ATGCAACAGGTGG
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGTGAGTAACAGGTT
--NTGATTGACAGN--
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCGTGAGTAACAGGTT
--BTGABTGACAGS--
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GCGTGAGTAACAGGTT-
-------AAACCGGTTT
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

GRHL1/MA0647.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCGTGAGTAACAGGTT--
------AAAACCGGTTTT
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGAGTAACAGGTT-
VAAACYKGTHWAACMRGTTT
 A C G T A C G T A C G T A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GCGTGAGTAACAGGTT-
--------AACAGGTGT
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GCGTGAGTAACAGGTT---
---------VCAGGTRDRY
 A C T G G T A C A T C G C G A T A C T G C G T A A C T G C G A T G T C A C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C