p-value: | 1e-9 |
log p-value: | -2.225e+01 |
Information Content per bp: | 1.804 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.70% |
Number of Background Sequences with motif | 3.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 47.0 +/- 24.0bp |
Average Position of motif in Background | 42.9 +/- 20.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 1 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCTCCTGCTGGCCCGG GGCCYCCTGCTGDGH--- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTCCTGCTGGCCCGG CCCCCTGCTGTG---- |
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Zfx/MA0146.2/Jaspar
Match Rank: | 3 |
Score: | 0.51 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GCTCCTGCTGGCCCGG----- -------CAGGCCNNGGCCNN |
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POL006.1_BREu/Jaspar
Match Rank: | 4 |
Score: | 0.51 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | GCTCCTGCTGGCCCGG- ---------GGCGCGCT |
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Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 5 |
Score: | 0.49 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCTCCTGCTGGCCCGG SNGCACCTGCHS------ |
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p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.49 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GCTCCTGCTGGCCCGG---- ------ACATGCCCGGGCAT |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 7 |
Score: | 0.48 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTCCTGCTGGCCCGG TCNCCTGCTGNGNNN- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 8 |
Score: | 0.48 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTCCTGCTGGCCCGG TNTCCTGCTGTGNNG- |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 9 |
Score: | 0.47 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GCTCCTGCTGGCCCGG --------AGGCCTAG |
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PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer
Match Rank: | 10 |
Score: | 0.47 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTCCTGCTGGCCCGG AGATGCTRCTRCCHT-- |
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