Information for 8-CCTCGGCTGGCAG (Motif 21)

A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A G T C A G T C C G T A A C T G A G T C T A G C A T C G C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.2 +/- 22.4bp
Average Position of motif in Background29.9 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCTCGGCTGGCAG
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCTCGGCTGGCAG
----GGTTGGCAT
 A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCTCGGCTGGCAG
-----CTTGGCAA
 A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCTCGGCTGGCAG-
----VGCTGWCAVB
 A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTCGGCTGGCAG---
NGTAGGTTGGCATNNN
 A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCTCGGCTGGCAG
------TTGGCA-
 A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCTCGGCTGGCAG-
-----NTTGGCANN
 A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCTCGGCTGGCAG
----TNNGGGCAG
 A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------CCTCGGCTGGCAG
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CCTCGGCTGGCAG
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A C T G A C T G A T G C C G T A A C T G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A