Information for 7-TGCTRACTTSCAG (Motif 18)

C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G
Reverse Opposite:
G A T C C G A T A C T G T A C G T C G A C G T A A C T G A G C T A G T C C T G A A T C G A T G C G C T A
p-value:1e-10
log p-value:-2.360e+01
Information Content per bp:1.682
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif239.5
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets43.6 +/- 20.5bp
Average Position of motif in Background54.0 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCTRACTTSCAG
--CCAACTGCCA-
 C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G
A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCTRACTTSCAG
TGCTGACTCA---
 C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TGCTRACTTSCAG
TAAAAATGCTGACTT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGCTRACTTSCAG
AAAATGCTGACT-----
 A C G T A C G T A C G T A C G T C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCTRACTTSCAG-
--BTGABTGACAGS
 C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCTRACTTSCAG
AATTTGCTGAC------
 A C G T A C G T A C G T A C G T C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCTRACTTSCAG--
---TGAGTGACAGSC
 C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGCTRACTTSCAG--
-----ACTTCCGGTN
 C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCTRACTTSCAG-
--NTGATTGACAGN
 C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTRACTTSCAG
AAAWWTGCTGACWWD---
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G T A G C A G C T T C A G C T G A G T A C C G A T A G C T A T G C A G T C C G T A C T A G
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T