Information for 6-CSAGAGCTCCACM (Motif 13)

T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C
Reverse Opposite:
A C T G A C T G A C G T A C T G A T C G C T G A A C T G A G T C A G C T A T G C A C G T A T C G A T C G
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.761
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif43.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.8 +/- 24.9bp
Average Position of motif in Background39.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.72
Offset:6
Orientation:forward strand
Alignment:CSAGAGCTCCACM
------ATCCAC-
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CSAGAGCTCCACM-----
---NRGCCCCRCCCHBNN
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CSAGAGCTCCACM----
-----GCTCCGCCCMCY
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CSAGAGCTCCACM---
----GGCTCYAKCAYC
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CSAGAGCTCCACM
-----GCTCCG--
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CSAGAGCTCCACM--
---SSAATCCACANN
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CSAGAGCTCCACM----
---NAGCCCCGCCCCCN
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CSAGAGCTCCACM--
-----GCCCCGCCCC
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CSAGAGCTCCACM--
-----GCCCCACCCA
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CSAGAGCTCCACM--
----GGCCACACCCA
 T A G C A T G C G T C A A T C G C T G A C T A G A G T C A G C T A T G C A G T C C G T A A G T C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A