Information for 19-BTGGCHHCAGGTCATC (Motif 33)

A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
Reverse Opposite:
A C T G G T C A A C G T A T C G C T G A T G A C A G T C A C G T A C T G C A T G C A G T A C T G T A G C A G T C C G T A T A G C
p-value:1e-9
log p-value:-2.182e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.5 +/- 17.0bp
Average Position of motif in Background47.5 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:BTGGCHHCAGGTCATC
---GCCTCAGGGCAT-
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:BTGGCHHCAGGTCATC
-TGGCACCATGCCAA-
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:BTGGCHHCAGGTCATC
------TRAGGTCA--
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:BTGGCHHCAGGTCATC
TAGGGCAAAGGTCA--
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:BTGGCHHCAGGTCATC
---SCCTSAGGSCAW-
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-BTGGCHHCAGGTCATC
CTTGGCANNNTGCCAA-
A C G T A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-BTGGCHHCAGGTCATC
GTAGGGCAAAGGTCA--
A C G T A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.55
Offset:8
Orientation:forward strand
Alignment:BTGGCHHCAGGTCATC
--------AGGTCA--
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:BTGGCHHCAGGTCATC
-TGWCCTCARNTGACC
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:BTGGCHHCAGGTCATC
NTGCCCANNGGTNA--
A T C G C G A T A C T G A C T G A G T C G C T A G A T C A G T C C G T A A C T G A C T G A G C T A T G C C G T A A C G T A G T C
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T