p-value: | 1e-9 |
log p-value: | -2.182e+01 |
Information Content per bp: | 1.781 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.79% |
Number of Background Sequences with motif | 5.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 68.5 +/- 17.0bp |
Average Position of motif in Background | 47.5 +/- 19.1bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | BTGGCHHCAGGTCATC ---GCCTCAGGGCAT- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | BTGGCHHCAGGTCATC -TGGCACCATGCCAA- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | BTGGCHHCAGGTCATC ------TRAGGTCA-- |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | BTGGCHHCAGGTCATC TAGGGCAAAGGTCA-- |
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AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | BTGGCHHCAGGTCATC ---SCCTSAGGSCAW- |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -BTGGCHHCAGGTCATC CTTGGCANNNTGCCAA- |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -BTGGCHHCAGGTCATC GTAGGGCAAAGGTCA-- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | BTGGCHHCAGGTCATC --------AGGTCA-- |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | BTGGCHHCAGGTCATC -TGWCCTCARNTGACC |
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PB0189.1_Tcfap2a_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | BTGGCHHCAGGTCATC NTGCCCANNGGTNA-- |
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