Information for 13-TGTCTGATTAATT (Motif 26)

C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T
Reverse Opposite:
C G T A C G T A A G C T C G A T C T G A G T C A C G A T A G T C C G T A C T A G C G T A T G A C C G T A
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.752
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.1 +/- 25.0bp
Average Position of motif in Background37.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGATTAATT
TWGTCTGV------
 A C G T C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGTCTGATTAATT---
---NTGATTAAATTAN
 C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTGATTAATT
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGTCTGATTAATT
CTGTCTGG------
 A C G T C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGTCTGATTAATT
VBSYGTCTGG------
 A C G T A C G T A C G T C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGTCTGATTAATT--
----TGATTAAATTA
 C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGTCTGATTAATT---
-CTTTGTTTACTTTTN
 C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T A C G T A C G T A C G T
A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGTCTGATTAATT-
----TGATTGATGA
 C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T A C G T
A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTCTGATTAATT
--TNTGTTTACTT
 C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T
A C G T A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTCTGATTAATT----
--NWTGATTRGRTTAWN
 C G A T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A G C T C G T A C T G A G C A T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C