Information for 14-YMYSTTCCAGWCAATA (Motif 22)

A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A T C G C G A T A G T C A C G T A C T G A C T G C G T A G T C A T A C G C T G A A C G T C T A G
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 22.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:YMYSTTCCAGWCAATA--
-CAAATCCAGACATCACA
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YMYSTTCCAGWCAATA
---ATGCCAGACN---
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YMYSTTCCAGWCAATA
-CATTTCCTGAGAAAT
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:YMYSTTCCAGWCAATA
------CCAGACAG--
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:YMYSTTCCAGWCAATA
------BCAGACWA--
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YMYSTTCCAGWCAATA
TKCTGTTCCA-------
 A C G T A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:YMYSTTCCAGWCAATA
--TTTTCCCGCCAAAA
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:YMYSTTCCAGWCAATA
----TTCCKNAGAA--
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:YMYSTTCCAGWCAATA
--TTTTCCA-------
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:YMYSTTCCAGWCAATA-
--ATTTGCATACAATGG
 A G T C G T C A A G C T A T G C A C G T A C G T A G T C A G T C C G T A A C T G C G T A T A G C G T C A C G T A A C G T C G T A A C G T
A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G