Information for 12-TGGCAGATGGCCTGCC (Motif 20)

A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C T G A C T G A G T C G T A C G C T A A C G T A T G C A C G T A C T G A G T C T G A C C G T A
p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 11.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGCAGATGGCCTGCC
-AACAGATGGC-----
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGCAGATGGCCTGCC
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGCAGATGGCCTGCC
CTTGGCANNNTGCCAA--
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCAGATGGCCTGCC
TGGCAGNCTGCCAG--
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGCAGATGGCCTGCC
-AACAGATGGT-----
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGATGGCCTGCC
VNAVCAGCTGGC-----
 A C G T A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGCAGATGGCCTGCC
-AACAKATGGY-----
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGCAGATGGCCTGCC
TGGCACCATGCCAA--
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGATGGCCTGCC
NNNTGGCAGTTGGTNN---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGCAGATGGCCTGCC
TGGCAGTTGN------
 A C G T A C T G A C T G A G T C C G T A A T C G C G T A C G A T A C T G T A C G A G T C G T A C A C G T A C T G A G T C A G T C
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T