Information for 7-CCATGGSTACACCCGC (Motif 10)

G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
Reverse Opposite:
C T A G T A G C C T A G C T A G C T A G A C G T A C T G A C G T T C G A A T C G G T A C A G T C C T G A A C G T C T A G A C T G
p-value:1e-12
log p-value:-2.901e+01
Information Content per bp:1.709
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.2 +/- 23.1bp
Average Position of motif in Background41.9 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCATGGSTACACCCGC
TTGCCATGGCAACN-----
 A C G T A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCATGGSTACACCCGC
GTTGCCATGGCAAC------
 A C G T A C G T A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCATGGSTACACCCGC
TTGCCATGGCAACC-----
 A C G T A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCATGGSTACACCCGC
TACCCTAGTTACCGA---
 A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T A C G T A C G T

RFX4/MA0799.1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCATGGSTACACCCGC
CGTTGCCATGGCAACG-----
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CCATGGSTACACCCGC-
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCATGGSTACACCCGC
----GGACACACCCCC
 G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCATGGSTACACCCGC
GTTGCCATGGCAACM-----
 A C G T A C G T A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCATGGSTACACCCGC
CGGTTGCCATGGCAAC------
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCATGGSTACACCCGC
----GGCCACACCCA-
 G T A C A G T C G T C A A G C T A C T G A C T G T A G C A G C T T C G A A G T C C G T A A G T C A G T C A G T C A T C G G A T C
A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T