Information for 15-TMTTTCWTGAAWTMAT (Motif 26)

A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T
Reverse Opposite:
G C T A C A G T A C G T C T G A G C T A A C G T A C G T G T A C C G T A C G A T C A T G C T G A T G C A C T G A C A T G C G T A
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.654
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif119.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.4 +/- 22.8bp
Average Position of motif in Background49.2 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT-
-NNNTATTGAATTGNNN
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T
A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PH0146.1_Pou3f1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT-
NANTTAATTAATTANNN
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PH0149.1_Pou3f4/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT-
GANTTAATTAATTAANN
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T

PH0091.1_Lhx1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT---
--NNTTATTAATTAATNCN
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

PH0142.1_Pou1f1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT-
GANTTAATTAATTANNN
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

PH0093.1_Lhx3/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT---
--NNTATTTAATTAATTNN
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT---
--ANNATTTAATTAATTNN
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0038.1_Hlx/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TMTTTCWTGAAWTMAT-
--TGTAATTAATTATGG
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T
A C G T A C G T C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

PH0019.1_Dbx2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TMTTTCWTGAAWTMAT--
--TTTAATTAATTAATTC
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TMTTTCWTGAAWTMAT---
--AGTTTTTAATTAATTTG
 A C G T G T A C G A C T A C G T A G C T G T A C C G T A A C G T C A T G G T C A G T C A C G A T G A C T G T C A G C T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G