Information for 12-YYCWTWAAAGAYAMCA (Motif 17)

A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T C T A G A C G T A G T C A C G T A G C T A C G T C G A T C G T A C G A T A T C G C T A G C T A G
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 14.2bp
Average Position of motif in Background51.1 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-YYCWTWAAAGAYAMCA
NCYAATAAAA-------
 A C G T A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-YYCWTWAAAGAYAMCA
NGCAATTAAA-------
 A C G T A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YYCWTWAAAGAYAMCA
CCYMATAAAA-------
 A C G T A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YYCWTWAAAGAYAMCA----
---ATAAATGACACCTATCA
 A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YYCWTWAAAGAYAMCA
CCAATAAAAA------
 A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YYCWTWAAAGAYAMCA
GNCTATAAAAGG-----
 A C G T A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YYCWTWAAAGAYAMCA
CCGATTTAAGCGACC-
 A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YYCWTWAAAGAYAMCA-------
-TTTTTAGAGATAAGAAATAAAG
 A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:YYCWTWAAAGAYAMCA---
----CAAACAACAACACCT
 A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.56
Offset:8
Orientation:forward strand
Alignment:YYCWTWAAAGAYAMCA
--------AGATAASR
 A G T C A G T C A T G C C G T A A C G T C G T A C G T A C T G A C G T A C T A G C G T A A G T C C G T A G T A C G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A