Information for 3-ACACAGTCTGTMACAG (Motif 3)

C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
Reverse Opposite:
G T A C C G A T A C T G C A G T A C G T G C T A T A G C G C T A T A C G T G C A A T G C C G A T A C T G A C G T A C T G G A C T
p-value:1e-15
log p-value:-3.622e+01
Information Content per bp:1.598
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.48%
Number of Background Sequences with motif717.7
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets56.5 +/- 24.5bp
Average Position of motif in Background49.1 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACACAGTCTGTMACAG
NAGAACAGNCTGTNCT--
 A C G T A C G T C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTCTGTMACAG
VAGRACAKNCTGTBC---
 A C G T A C G T C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTCTGTMACAG
NAGNACANNNTGTNCT--
 A C G T A C G T C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTCTGTMACAG
VAGRACAKWCTGTYC---
 A C G T A C G T C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACACAGTCTGTMACAG
----TGTCTGDCACCT
 C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACACAGTCTGTMACAG
---CTGTCTGTCACCT
 C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTCTGTMACAG
AAGAACATWHTGTTC---
 A C G T A C G T C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACACAGTCTGTMACAG
GGGAACATTGTGTTCCC-
 A C G T A C G T C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ACACAGTCTGTMACAG
ACAAAG----------
 C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACACAGTCTGTMACAG
---TWGTCTGV-----
 C T G A T G A C G T C A T G A C C G T A T A C G A C G T A T G C C G A T A T C G C G A T G T C A G T C A G T A C C G T A C A T G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T