Information for 10-ACAGGACACC (Motif 19)

C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C G T A G T C A G T C A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.096e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.2 +/- 21.1bp
Average Position of motif in Background55.7 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ACAGGACACC-----
ATAAATGACACCTATCA
 A C G T A C G T C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACAGGACACC
NACAGGAAAT-
 A C G T C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACAGGACACC
-AAGGTCAC-
 C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACAGGACACC--
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGACACC
NACAGGAAAT-
 A C G T C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACAGGACACC
AACAGGAAGT-
 A C G T C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACAGGACACC
TRAGGTCA--
 C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGACACC
CACAGN-----
 A C G T C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACAGGACACC
ACAGGAAGTG
 C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACAGGACACC--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G