Information for 10-TGCATGGTACAGG (Motif 13)

A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C G T C G T A A G T C A G T C C T G A A C G T A C T G G T A C C G T A
p-value:1e-9
log p-value:-2.191e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 26.6bp
Average Position of motif in Background42.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCATGGTACAGG
--CCAGGAACAG-
 A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCATGGTACAGG
--NTTGATACATT
 A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGCATGGTACAGG
-------CACAGN
 A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCATGGTACAGG
ATGCATAATTCA--
 A C G T A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TGCATGGTACAGG---
---ATGCAACAGGTGG
 A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGCATGGTACAGG-
ATGAATWATTCATGA
 A C G T A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGCATGGTACAGG-
ATGCATWATGCATRW
 A C G T A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TGCATGGTACAGG-----
--------VCAGGTRDRY
 A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TGCATGGTACAGG-
----TGGAACAGMA
 A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------TGCATGGTACAGG-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C T G A C T G A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A