Information for 1-MAGAACAKWMTGTTCT (Motif 1)

T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
Reverse Opposite:
C T G A T C A G C G T A C G T A A G T C C T G A C A G T C G T A G T C A A G C T T C A G G C A T C A G T A G T C G C A T A C T G
p-value:1e-84
log p-value:-1.948e+02
Information Content per bp:1.532
Number of Target Sequences with motif193.0
Percentage of Target Sequences with motif25.53%
Number of Background Sequences with motif2117.2
Percentage of Background Sequences with motif4.59%
Average Position of motif in Targets49.7 +/- 23.4bp
Average Position of motif in Background52.3 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:MAGAACAKWMTGTTCT
AAGAACATWHTGTTC-
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:forward strand
Alignment:MAGAACAKWMTGTTCT
VAGRACAKWCTGTYC-
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:MAGAACAKWMTGTTCT
NAGAACAGNCTGTNCT
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:MAGAACAKWMTGTTCT
VAGRACAKNCTGTBC-
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.87
Offset:0
Orientation:forward strand
Alignment:MAGAACAKWMTGTTCT
NAGNACANNNTGTNCT
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:MAGAACAKWMTGTTCT-
GGGAACATTGTGTTCCC
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:MAGAACAKWMTGTTCT-
NGGAACATNATGTACCC
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:MAGAACAKWMTGTTCT-
NGGTACACNGTGTTCCC
 T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--MAGAACAKWMTGTTCT
CCAGGAACAG--------
 A C G T A C G T T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--MAGAACAKWMTGTTCT
TTAAGAACAATAAATT--
 A C G T A C G T T G A C C G T A T C A G G T C A C G T A A G T C C T G A C A G T G C A T G T C A G A C T T C A G G C A T G C A T A G T C G A C T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T