Information for 3-TGTTCTGTCC (Motif 2)

C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C
Reverse Opposite:
C A T G C A T G G C T A T G A C C G T A T C A G T C G A C T G A G A T C G T C A
p-value:1e-22
log p-value:-5.190e+01
Information Content per bp:1.533
Number of Target Sequences with motif317.0
Percentage of Target Sequences with motif40.38%
Number of Background Sequences with motif11357.9
Percentage of Background Sequences with motif24.34%
Average Position of motif in Targets47.0 +/- 25.5bp
Average Position of motif in Background50.4 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTCTGTCC--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTCTGTCC----
NNNNTTGTGTGCTTNN
 A C G T A C G T C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGTTCTGTCC----
----CTGTTCCTGG
 C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGTTCTGTCC-
GTNTTGTTGTGANNT
 A C G T A C G T A C G T A C G T C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTTCTGTCC
---GCTGTG-
 C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTTCTGTCC-
---GCTGTCAA
 C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGTTCTGTCC-
----NTGTCAN
 C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTTCTGTCC-
---CCTGTCAA
 C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCTGTCC----
WCATTTTGKCCTCYT
 A C G T C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGTTCTGTCC
TAATTGTTCTAAAC
 A C G T A C G T A C G T A C G T C A G T C T A G G A C T A G C T A G T C G C A T A C T G C G A T G T A C G T A C
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C