Information for 17-TYAAGAACAATTT (Motif 23)

A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A C G T A C A G T A C G T A C T G A C G T A C G T A G T C A G C T A C G T T C G A C T G A
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.8 +/- 22.6bp
Average Position of motif in Background61.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TYAAGAACAATTT---
TTAAGAACAATAAATT
 A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TYAAGAACAATTT---
TTTAGAACAATAAAAT
 A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TYAAGAACAATTT
NTTNAGAACAATTA
 A C G T A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TYAAGAACAATTT----
TNCNNAACAATTTTTNC
 A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TYAAGAACAATTT-
NNCNNAACAATTNT
 A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TYAAGAACAATTT----
TNNAGAACAATANATNN
 A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TYAAGAACAATTT---
NNNNNGAACAATTGANN
 A C G T A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TYAAGAACAATTT----
TAGTGAACAATAGATTT
 A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TYAAGAACAATTT--
NNTNANAACAATTNNA
 A C G T A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TYAAGAACAATTT-------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A G C T A G C T C G T A C T G A A C T G T C G A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A