Information for 7-TCTAGGTCAG (Motif 12)

G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
Reverse Opposite:
G A T C C A G T A C T G C G T A G T A C G A T C A G C T C T G A C A T G C G T A
p-value:1e-12
log p-value:-2.803e+01
Information Content per bp:1.664
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif7.16%
Number of Background Sequences with motif1101.7
Percentage of Background Sequences with motif2.37%
Average Position of motif in Targets47.9 +/- 21.5bp
Average Position of motif in Background48.8 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-TCTAGGTCAG
ATCAAGGTCA-
 A C G T G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TCTAGGTCAG
TCAAGGTCAN
 G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TCTAGGTCAG-
TCAAGGTCATA
 G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TCTAGGTCAG
AAYTAGGTCA-
 A C G T G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TCTAGGTCAG
BTCAAGGTCA-
 A C G T G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TCTAGGTCAG-
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TCTAGGTCAG
TATAAGTAGGTCAA
 A C G T A C G T A C G T A C G T G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:forward strand
Alignment:TCTAGGTCAG
---AGGTCA-
 G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TCTAGGTCAG
TTCAAGGTCAT
 A C G T G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TCTAGGTCAG
TCAAGGTCAT
 G C A T G T A C G A C T T C G A C T A G C A T G G C A T T G A C G T C A C T A G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T