Information for 1-GAACAGACTGTNCYKK (Motif 1)

C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
Reverse Opposite:
T G A C G T C A C T G A C T A G C T G A C G T A T A G C C G T A A C T G G C A T T G A C G C A T A T C G A G C T A G C T G A T C
p-value:1e-80
log p-value:-1.863e+02
Information Content per bp:1.500
Number of Target Sequences with motif298.0
Percentage of Target Sequences with motif38.11%
Number of Background Sequences with motif5379.4
Percentage of Background Sequences with motif11.55%
Average Position of motif in Targets53.2 +/- 22.4bp
Average Position of motif in Background50.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GAACAGACTGTNCYKK
GVACAGNMTGTYCTB-
 C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GAACAGACTGTNCYKK
GRACAGWMTGTYCTB-
 C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GAACAGACTGTNCYKK
AGNACAGNCTGTTCTN-
 A C G T C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--GAACAGACTGTNCYKK
NAGNACANNNTGTNCT--
 A C G T A C G T C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GAACAGACTGTNCYKK
GAACADWATGTTCTT-
 C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GAACAGACTGTNCYKK
GGGAACACAATGTTCCC-
 A C G T A C G T C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GAACAGACTGTNCYKK
NGGAACATNATGTACCC-
 A C G T A C G T C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C A C G T

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GAACAGACTGTNCYKK
GGGAACACGGTGTACCC-
 A C G T A C G T C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAACAGACTGTNCYKK
CCAGGAACAG----------
 A C G T A C G T A C G T A C G T C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAACAGACTGTNCYKK
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T C T A G T C G A C T G A T A G C C G T A A C T G C G T A T G A C G C A T A T C G G C A T G A C T G A T C G A C T C A G T A C T G
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T