Information for 2-TGTGCTGTGCAVAKWC (Motif 2)

A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
Reverse Opposite:
A T C G C G A T T G C A G C A T A T C G A G C T A C T G G T A C G T C A T A G C C T G A T C A G G T A C G C T A T A G C T C G A
p-value:1e-30
log p-value:-6.939e+01
Information Content per bp:1.541
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif13.91%
Number of Background Sequences with motif1701.4
Percentage of Background Sequences with motif3.69%
Average Position of motif in Targets49.0 +/- 23.9bp
Average Position of motif in Background48.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCTGTGCAVAKWC
CTGTTCCTGG-------
 A C G T A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTGCTGTGCAVAKWC
--TTCTTGGAAAN---
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGTGCTGTGCAVAKWC
-CTTCTGGGAAA----
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTGCTGTGCAVAKWC
-TTTCTNAGAAAN---
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGTGCTGTGCAVAKWC--
-CAGATGTGCACATACGT
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C A C G T A C G T
A C G T G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTGCTGTGCAVAKWC
--TTCTNMGGAA----
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTGCTGTGCAVAKWC
-WDNCTGGGCA-----
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCTGTGCAVAKWC
NNNNTTGTGTGCTTNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTGCTGTGCAVAKWC--
-TACATGTGCACATAAAA
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C A C G T A C G T
A C G T C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Stat6/MA0520.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTGCTGTGCAVAKWC
ANTTCTCAGGAANNN-
 A G C T A T C G C G A T C A T G A G T C G A C T A T C G C A G T C A T G T G A C T C G A T A G C C G T A A C G T G C T A A T G C
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G A C G T