Information for 1-AGAAVRGAATGTKCTS (Motif 1)

C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
Reverse Opposite:
T A G C C G T A C T A G T G A C C G T A T A G C C G T A A C G T C A G T A G T C G A C T A T C G C A G T A C G T A G T C G C A T
p-value:1e-56
log p-value:-1.302e+02
Information Content per bp:1.545
Number of Target Sequences with motif154.0
Percentage of Target Sequences with motif20.40%
Number of Background Sequences with motif2016.5
Percentage of Background Sequences with motif4.37%
Average Position of motif in Targets54.8 +/- 23.9bp
Average Position of motif in Background49.7 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AGAAVRGAATGTKCTS
-GRACAGWMTGTYCTB
 C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AGAAVRGAATGTKCTS
AGNACANNNTGTNCTN
 C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AGAAVRGAATGTKCTS
VAGRACAKNCTGTBC--
 A C G T C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AGAAVRGAATGTKCTS
-GAACADWATGTTCTT
 C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AGAAVRGAATGTKCTS
NAGAACAGNCTGTNCT-
 A C G T C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGAAVRGAATGTKCTS
GGGAACACAATGTTCCC
 A C G T C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGAAVRGAATGTKCTS
GGGTACATAATGTTCCC
 A C G T C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Ar/MA0007.3/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGAAVRGAATGTKCTS
GGGAACACGGTGTACCC
 A C G T C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGAAVRGAATGTKCTS
---NTGGAATGTG---
 C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGAAVRGAATGTKCTS
---NTGGAATGTN---
 C G T A C T A G T G C A G T C A T A G C C T G A T C A G G C T A T G C A G C A T A T C G C G A T A C T G G A T C G C A T A T C G
A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T