Information for 2-HNNTGTTTGCWYW (Motif 2)

G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T
Reverse Opposite:
G C T A T C G A C G A T T C A G G A T C T G C A T G C A T C G A A G T C C G T A T G A C C A G T C A T G
p-value:1e-23
log p-value:-5.508e+01
Information Content per bp:1.529
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif9.01%
Number of Background Sequences with motif1026.7
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets52.8 +/- 24.1bp
Average Position of motif in Background51.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.93
Offset:3
Orientation:forward strand
Alignment:HNNTGTTTGCWYW
---TRTTTACTTW
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T
A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:HNNTGTTTGCWYW
---TGTTTACTTT
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:HNNTGTTTGCWYW
---TGTTTACTTT
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-HNNTGTTTGCWYW-
TCCATGTTTACTTTG
 A C G T G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:HNNTGTTTGCWYW-----
-NSTGTTTRCWCAGBNNN
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.88
Offset:3
Orientation:forward strand
Alignment:HNNTGTTTGCWYW--
---TGTTTACTTAGG
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.88
Offset:0
Orientation:forward strand
Alignment:HNNTGTTTGCWYW--
BSNTGTTTACWYWGN
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.87
Offset:3
Orientation:reverse strand
Alignment:HNNTGTTTGCWYW
---TGTTTAC---
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T
A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:HNNTGTTTGCWYW
-TTTGTTTACTTA
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T
A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.87
Offset:1
Orientation:forward strand
Alignment:HNNTGTTTGCWYW
-CNTGTTTACATA
 G T A C G C T A A C T G G C A T C T A G A G C T A C G T A C G T C T A G A G T C G C T A A G C T C G A T
A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A