Information for 8-TCCTGCCAAG (Motif 19)

G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
Reverse Opposite:
G T A C G A C T C G A T A C T G A C T G T A G C C G T A C T A G A T C G C T G A
p-value:1e-9
log p-value:-2.277e+01
Information Content per bp:1.648
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif10.11%
Number of Background Sequences with motif2274.3
Percentage of Background Sequences with motif4.72%
Average Position of motif in Targets50.1 +/- 27.6bp
Average Position of motif in Background49.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TCCTGCCAAG
--TTGCCAAG
 G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TCCTGCCAAG-
-GGTGCCAAGT
 G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TCCTGCCAAG
-CGTGCCAAG
 G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TCCTGCCAAG
---TGCCAA-
 G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCCTGCCAAG
-GCTGTCAA-
 G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

E2F8/MA0865.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCCTGCCAAG
TTTCCCGCCAAA
 A C G T A C G T G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCCAAG
TTTCCCGCCMAV
 A C G T A C G T G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F7/MA0758.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCCTGCCAAG-
TTTTCCCGCCAAAA
 A C G T A C G T A C G T G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCCTGCCAAG
-CCTGTCAA-
 G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCCTGCCAAG---
---TGCCCAGNHW
 G A C T T A G C G A T C G C A T A T C G T G A C T G A C G C T A C T G A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A