Information for 9-AGAGCWGGKSTKG (Motif 18)

C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
Reverse Opposite:
G T A C G T A C C G T A A T G C G T A C A G T C A G T C C G A T A C T G A G T C A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.875
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.1 +/- 27.4bp
Average Position of motif in Background59.2 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAGCWGGKSTKG
-SDGCAGGTGCNS
 C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGAGCWGGKSTKG
NAACAGCTGG-----
 A C G T A C G T C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGCWGGKSTKG
CACAGCAGGGGG--
 A C G T C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGAGCWGGKSTKG
--NNCAGGTGTN-
 C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGAGCWGGKSTKG
--AACAGGTGT--
 C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGAGCWGGKSTKG
----CAGGTGAGG
 C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAGCWGGKSTKG--
GGGGCTYGKCTGGGA
 C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAGCWGGKSTKG
--NNCAGGTGCG-
 C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAGCWGGKSTKG
--NNCAGGTGNN-
 C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAGCWGGKSTKG
AACAGCTG------
 A C G T C G T A A C T G C G T A C T A G A G T C C G T A A C T G C T A G A C T G A T C G A C G T A C T G A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T