Information for 10-CTGCTTAAGG (Motif 16)

A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G
Reverse Opposite:
A G T C A T G C C A G T G C A T G T C A C G T A A C T G G T A C C G T A C T A G
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.831
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif169.1
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets49.0 +/- 26.5bp
Average Position of motif in Background49.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGCTTAAGG--
-NGCCTNAGGCN
 A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGCTTAAGG--
-NGCCTGAGGCN
 A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCTTAAGG--
-TGCCTGAGGCN
 A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGCTTAAGG
CTGTTTAC--
 A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGCTTAAGG--
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGCTTAAGG-
-TGATTGATGA
 A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGCTTAAGG
AATTTGCTGAC--
 A C G T A C G T A C G T A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCTTAAGG
-TGTTTAC--
 A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G
A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGCTTAAGG--
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGCTTAAGG
CTAATTAA--
 A G T C C G A T A C T G G T A C G C A T A C G T C G T A G T C A A T C G A C T G
T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T