Information for 6-TGCATAAAGGCAC (Motif 10)

A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
Reverse Opposite:
T A C G A C G T A C T G A G T C A G T C A C G T A C G T C G A T C G T A C G A T T A C G A G T C G T C A
p-value:1e-10
log p-value:-2.459e+01
Information Content per bp:1.833
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.8 +/- 8.1bp
Average Position of motif in Background54.2 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGCATAAAGGCAC
----AAAAGTCAA
 A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCATAAAGGCAC
CCGCCCAAGGGCAG
 A C G T A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGCATAAAGGCAC
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCATAAAGGCAC
TGCCCCAGGGCA-
 A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCATAAAGGCAC
GGAACAAAGR---
 A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCATAAAGGCAC
TGCCCCAGGGCA-
 A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCATAAAGGCAC
TTGCCCTAGGGCAT
 A C G T A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGCATAAAGGCAC----
------AAGGCAAGTGT
 A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGCATAAAGGCAC
--AACAAAGG---
 A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGCATAAAGGCAC
-----AAGGTCAC
 A C G T A C T G A T G C C G T A G C A T C G T A C G T A C G T A A C T G C T A G A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C