Information for 1-GGTCASGSTGACCTGG (Motif 1)

C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
Reverse Opposite:
T A G C A G T C C T G A A C T G A C T G C A G T A G T C C G T A A T C G G T A C T A C G A C G T A T C G C G T A A G T C G T A C
p-value:1e-42
log p-value:-9.775e+01
Information Content per bp:1.750
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.1 +/- 21.9bp
Average Position of motif in Background56.9 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GGTCASGSTGACCTGG
GGTCANNGTGACCTN-
 C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GGTCASGSTGACCTGG
AAGGTCACGGTGACCTG-
 A C G T A C G T C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G A C G T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GGTCASGSTGACCTGG
AGGNCANNGTGACCT--
 A C G T C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----GGTCASGSTGACCTGG
AGTAGGTCACNGTGACCTAC
 A C G T A C G T A C G T A C G T C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.67
Offset:8
Orientation:reverse strand
Alignment:GGTCASGSTGACCTGG
--------TGACCT--
 C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTCASGSTGACCTGG
TGACCCAGTGACCTAC
 C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGTCASGSTGACCTGG----
----NNNNTGACCCGGCGCG
 C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:GGTCASGSTGACCTGG--
--------TGACCTTGAT
 C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:GGTCASGSTGACCTGG
--------TGACCTYA
 C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:7
Orientation:forward strand
Alignment:GGTCASGSTGACCTGG-
-------NTGACCTTGA
 C A T G A C T G C G A T A T G C C G T A A T G C C A T G T A G C A C G T A C T G G T C A G T A C A G T C G A C T C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A