Information for 20-CAGGGGATTACTA (Motif 32)

A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A
Reverse Opposite:
G A C T C G T A A C T G C G A T C G T A C G T A A C G T A G T C A T G C G T A C A G T C C G A T A C T G
p-value:1e-6
log p-value:-1.419e+01
Information Content per bp:1.798
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 27.3bp
Average Position of motif in Background61.8 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGATTACTA---
AGAGGGGATTAATTTAT
 A C G T A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGATTACTA---
TGAAGGGATTAATCATC
 A C G T A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0063.1_Hoxb8/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGATTACTA--
ACCGGCAATTAATAAA
 A C G T A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGGGGATTACTA
--NGGGATTA---
 A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGGGGATTACTA
--GGGAATTTCC-
 A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGATTACTA---
TGTAGGGATTAATTGTC
 A C G T A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGGGGATTACTA
AAGAGGATTAG--
 A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGGGGATTACTA
--GNGGATTAGN-
 A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAGGGGATTACTA
--NNGGATTAGN-
 A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGGGGATTACTA
---GGGATTANN-
 A G T C C G T A A C T G A C T G A T C G A C T G C G T A A C G T A C G T C G T A G T A C A C G T C G T A
A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T