Information for 7-ATAGTGTTTGGCCCTT (Motif 19)

G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G C T A G A C T G A T G C A G T C C G T A C G T A G T C A A G T C C G T A A G T C G A C T C G T A C G A T
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 25.4bp
Average Position of motif in Background51.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATAGTGTTTGGCCCTT
NNGTANTGTTTTNC----
 A C G T A C G T G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATAGTGTTTGGCCCTT
NNCTTTGTTTTGNTNNN
 A C G T G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATAGTGTTTGGCCCTT
----TGATTGGCTANN
 G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATAGTGTTTGGCCCTT-
-TGGACTTTGNNCTNTG
 G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ATAGTGTTTGGCCCTT
------NTTGGCANN-
 G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ATAGTGTTTGGCCCTT
-------TTGGCA---
 G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATAGTGTTTGGCCCTT
NNTTTTGTTTTGATNT-
 A C G T G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:ATAGTGTTTGGCCCTT--
---CTGATTGGTCNATTT
 G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ATAGTGTTTGGCCCTT
----TGTCTGDCACCT
 G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATAGTGTTTGGCCCTT
-TGGACTTTGNNCTCN
 G C T A A C G T C T G A A C T G A C G T A C T G A C G T A C G T A C G T C T A G A T C G A G T C A G T C A G T C A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T