Information for 6-CAGWGGCCWCTCA (Motif 10)

G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A
Reverse Opposite:
C G A T C T A G T C G A A T C G C G A T A C T G T C A G A T G C A G T C G C T A A G T C C G A T C A T G
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.644
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 18.3bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAGWGGCCWCTCA--
----AGCCACTCAAG
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGWGGCCWCTCA
-ACTAGCCAATCA
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGWGGCCWCTCA-
--SCTGTCAVTCAV
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGWGGCCWCTCA
CAAAGGTCAG---
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGWGGCCWCTCA----
-AAGCACCTGTCAATAT
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGWGGCCWCTCA----
-AAAGACCTGTCAATCC
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGWGGCCWCTCA-
----AASCACTCAA
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAGWGGCCWCTCA-
------CCTGTCAA
 G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------CAGWGGCCWCTCA
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAGWGGCCWCTCA
ACAAAGGNBCCT--
 A C G T G A T C C G T A T C A G C G A T T C A G A T C G A G T C T G A C C G T A T A G C A G C T G A T C C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T