Information for 6-YSTAARAGATWTM (Motif 9)

A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G A T C G T A A C G T A G T C A C G T A G T C A C G T A C G T C G T A A T C G C T A G
p-value:1e-11
log p-value:-2.736e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 11.8bp
Average Position of motif in Background55.4 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:YSTAARAGATWTM-----
-GACAGAGATATCAGTGT
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:YSTAARAGATWTM--
----AAGGATATNTN
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YSTAARAGATWTM
--TAATTGATTA-
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-YSTAARAGATWTM
CCTTAATNGNTTTT
 A C G T A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YSTAARAGATWTM
GCTAAACGGT---
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YSTAARAGATWTM
GCTAATTGCT---
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:YSTAARAGATWTM
--TAATCGATTA-
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A A C G T

PAX3/MA0780.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:YSTAARAGATWTM
--TAATCGATTA-
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YSTAARAGATWTM
-NTAATKGTTT--
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:YSTAARAGATWTM
---CNGTGATTTN
 A G C T T A G C A C G T G T C A C G T A C T A G C G T A C T A G C G T A G A C T C G A T A C G T G T C A
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G